Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942753.1_cds_XP_016486109.1_76975
CDS Infomation

[gene=LOC107806468] [db_xref=GeneID:107806468] [protein=F-box protein At5g03100-like] [protein_id=XP_016486109.1] [location=complement(join(31369..31674,34658..34828,35317..36234))] [gbkey=CDS]
Sequence

ATGGAAATGCAGAGAAAAATCACGGCTAGAGAAGACCGACTTAGTAATTTGCCCGATGAA
ATTCTAATTCACATCCTCTCTATGTTGCCGAGGTGGCACAATAAAGAAGTTGTGAGAAGC
AGCGTATTATCTAGACGGTGGAGATTTCTTTGGAAGTCCGTCCCAATATCACTCGATTTC
GACTTCCCCATTCGTGAAAGCGAAAATGACAATCTCCTTTACCTGGCTTCCATTCATAGA
GAGCTTTATTATTGGAGGAATTGCGAGAAAATACAGAAATTCAGGGTCTGGCGCCTTAGG
TACGAGGATCGTTTTGCTAAAGATATTGATTTATGGGTACATTTTGCAATTAAAGTTGCT
AATGTTGAAAGTTTTGCACTTGGAATTATCGATACAAATCACCAAAGATATGAGTTCCCT
CAATTTGCATATAAAAATGCATCGTTGAGTTATTTGGCTTTATGGTACTGCCAACTCAAC
CCTACTGGTAGTGTTAATTGGAGTAATCTCGTTTCTCTTTCACTTGGGTCTTTGCCTTTG
ACTGATGGTGTAATGGAAAAGGTATTATCTGGTTGCCCTAACTTGGAATGCTTGGAACTG
GATAGTGTTTCGGGCATTCATCGTTTGGAAATCAGCTCTGTGAAGCTGACAAAATTGACC
ATACGCAATTACCTAAGTGAGAATCCTGACCTTTGGCTCGAAATATTAGCTCCGTATATT
CAAAATTTGCAACTTTCTGGGTATTGCATTAACATATGTATCCGACAGAGAAATGTGGCT
TCACTTGTCACTGCAGCCCTTCATTTAATTTTTGATTTTGGGAATCACGACTTGGAGAAG
GAGGGTAGCTATTTGAAGGAACTTCTTCACGGTATTGCCCATGTCGAGAATCTTGAATTG
GGTCCATGGTGCATCGAGTTCCTGTCCGTACTGGAGTTGAAAGGGTGGCAGCCTCCACCA
TCAAACTGGAAATTCTTAGAACTTCCAGCCTTACAACAGTTGGACTTACCTGGACTTTGC
AGCTTTCTCCCGTGTTCATTGGATCTTGAGGCATTGGTCATTGACTGGAGATACAATGAT
GAAGAAAGAGACCTACTGTCAAGGTACACAAATGAGGATGAACAGATCAGGAGGTTTGAA
ACACGTAATTTTAACTGCTCATTTCCAAATTTGAAGACCATCGAGATCATTAACTTTCAT
GGACCACTAAGTGAAAATAAGTCGCTGCTGCCATTGGTAAAATATTTTCTCAAGCATGCA
ACTGTGCTTGAAAAGTTCGTCATTGACGCCATATTCAAAGAGAGTGATATGCTGGATCAT
TTCGAAATGACACAGGAGTTACTAAGCTTTCCAAGATCCTCTCCGCAGGCTTCTGTTGTC
TTTTCTTATCGATAA

Peptide Sequence

PEP ID

XP_016486109.1
PEP Infomation

PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
Sequence

MEMQRKITAREDRLSNLPDEILIHILSMLPRWHNKEVVRSSVLSRRWRFLWKSVPISLDF
DFPIRESENDNLLYLASIHRELYYWRNCEKIQKFRVWRLRYEDRFAKDIDLWVHFAIKVA
NVESFALGIIDTNHQRYEFPQFAYKNASLSYLALWYCQLNPTGSVNWSNLVSLSLGSLPL
TDGVMEKVLSGCPNLECLELDSVSGIHRLEISSVKLTKLTIRNYLSENPDLWLEILAPYI
QNLQLSGYCINICIRQRNVASLVTAALHLIFDFGNHDLEKEGSYLKELLHGIAHVENLEL
GPWCIEFLSVLELKGWQPPPSNWKFLELPALQQLDLPGLCSFLPCSLDLEALVIDWRYND
EERDLLSRYTNEDEQIRRFETRNFNCSFPNLKTIEIINFHGPLSENKSLLPLVKYFLKHA
TVLEKFVIDAIFKESDMLDHFEMTQELLSFPRSSPQASVVFSYR

Transcript Sequence

Gene sequence data has not been registered.